PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010104393.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family Trihelix
Protein Properties Length: 304aa    MW: 34083.4 Da    PI: 9.7484
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010104393.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix47.54.8e-1527118187
        trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 
                     +W+ + + +Li+a  e+  +l+rg+l++++W+ev++++        + +r+ +qCk++++ l+k+yk +k++ ++   + +s +p+f +l+a
  XP_010104393.1  27 CWSADATFTLIDAWGERYLELKRGNLRQKHWQEVADAVnsdhcDGPKSRRTDIQCKNRIDTLKKKYKIEKARVSDSDGTYVSPWPFFARLDA 118
                     7*************************************877656666789************************99999999*******985 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138375.9E-2625119No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 304 aa     Download sequence    Send to blast
MDSDTGTPSP AKAPLARTTP FSGREDCWSA DATFTLIDAW GERYLELKRG NLRQKHWQEV  60
ADAVNSDHCD GPKSRRTDIQ CKNRIDTLKK KYKIEKARVS DSDGTYVSPW PFFARLDALI  120
GATFPVAKKL SPLLATAAGG YRNPSPPSWA RYSPVPVGPR SATLKRPAPP APFAVDYEGS  180
ARNFSAFAAA AVAALAEEEA EDEESDRSGS RSSMKSRGRD EREREPMYRE LAKAIERFGE  240
IYQRVEVAKQ RQMVELEKQR MQFAKDLEFQ RMQLFMETQV QLQKIKRAKR SPGAGEPSSS  300
LPSF
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00413DAPTransfer from AT3G58630Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010104393.10.0hypothetical protein L484_010345
SwissprotQ9LJG82e-38ASIL2_ARATH; Trihelix transcription factor ASIL2
TrEMBLW9RZ450.0W9RZ45_9R
STRINGVIT_12s0028g02150.t019e-98(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF18873379
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58630.11e-52sequence-specific DNA binding transcription factors